Anubha Dey is a dedicated Ph.D. researcher at the University of Hyderabad with a strong background in computational biology and machine learning. She has contributed significantly to understanding genetic interactions and cancer research through advanced modeling techniques. With a passion for teaching and mentoring, Anubha aspires to inspire future leaders in scientific innovation.
Ph.D. (Pursuing), University of Hyderabad, 2019-present. Master of Technology, Anna University, 2017-2019. Bachelor of Technology, Maulana Abul Kalam Azad University of Technology, West Bengal
Experience
Researcher: Developing machine learning models for cancer biology and genetic interactions. Assistant System Engineer-Trainee, Tata Consultancy Services, 2016-2017. Presented findings at renowned conferences like ICGA and CSHL
Award and Honor
Best Oral Presentation, BioAnveshna 2024. Best Poster Presentation, International Cancer Symposium 2022. Selected for HySci 2024 Oral Talk, IIT Hyderabad. Qualified JEST 2019, a prestigious entrance test
Research Focus
Machine learning in genetic interaction prediction. Synthetic lethal interactions in cancer. Transcript complexity and RNA splicing. Chromatin loop dynamics and epigenetics
Publications Top Noted
Title: Chromatin loop dynamics during cellular differentiation are associated with changes to both anchor and internal regulatory features Year: 2023 Authors: ML Bond, ES Davis, IY Quiroga, A Dey, M Kiran, MI Love, H Won Citation: Genome Research 33 (8), 1258-1268
Title: Inefficient splicing of long non-coding RNAs is associated with higher transcript complexity in human and mouse Year: 2023 Authors: K Basu, A Dey, M Kiran Citation: RNA Biology 20 (1), 563-572
Title: MAGICAL: A multi-class classifier to predict synthetic lethal and viable interactions using protein-protein interaction network Year: 2024 Authors: A Dey, S Mudunuri, M Kiran Citation: PLOS Computational Biology 20 (8), e1012336
Title: CaTCH: Calculating transcript complexity of human genes Year: 2024 Authors: K Koushiki Basu, Anubha Dey Citation: Methodx
A seasoned educator and researcher with extensive experience in physics, holding positions from Assistant to Associate Professor at IAU, Urmia, and Urmia University of Technology. Specialized in teaching a range of undergraduate to Ph.D. courses including Quantum Mechanics, Laser Physics, and Nonlinear Dynamical Systems. Proficient in Maple and Matlab programming with a strong background in finite element method analysis. Led impactful research projects in chaotic systems, cancer treatment, and national security, earning multiple awards including the Kharazmi Scientific Festival Second Prize. A recognized leader in academia with a commitment to advancing scientific knowledge and education.
🧑🏫 B.Sc. Courses: General Physics (I & II), Mathematical Physics II, Quantum Mechanics (I & II), Laser, Computational Physics, Wave Physics. 🎓 M.Sc. Courses: Advanced Quantum Mechanics (I & II), Advanced Statistical Mechanics, Electrodynamics I, Advanced Computational Physics. 🎓 Ph.D. Courses: Nonlinear Dynamical and Chaos, Quantum Chaos, Bose Mesner Algebra, Open Quantum Systems. 💻 Professional Skills: Maple & Matlab Programming, Finite Element Method Analysis
🏢 Employment:
Assistant Professor: IAU, Urmia (2001-2008), Research Vice-Chancellor of the University (IAU) (2003-2010), Associate Professor: IAU, Urmia (2008-2010), Assistant Professor: Urmia University of Technology (2010-2014), Student Affairs Vice Chancellor of the University (2010-2013), Director of Physics Department (2014-2020)
🔬 Research Projects:
Solvable Chaotic Maps with Random Dynamical Parameters (1998-2001) – Institute for Research in Fundamental Science (IPM), Iran, Cancer Cells Healing by Using Concentrated Ultrasound Waves (2001-2004) – Sahand University of Technology, Tabriz, Iran, Reconstruction of Phase Space for a Nonlinear Dynamical System by Time Series (2004-2006) – IAU, Urmia, Iran, Designing the System of Confidentiality and Protecting National Security in the Country (2020-2022) – INSF, Iran
🏆 Awards and Recognitions:
Winning the Second Prize for Conducting the Fundamental Research Project from Kharazmi Scientific Festival, Tehran, Iran (2001), Winning the First Prize for a Research Project from Scientific Festival Urmia, West Azerbaijan (2005), Winning the First Prize for a Research Project from First Basij Festival, Urmia, West Azerbaijan (2006), Winning the First Prize for a Research Project from Scientific Festival Urmia, West Azerbaijan (2008), Winning the Prize of Basij Festival, Tehran, Iran (2010), Winning the First Prize for a Research Project from Scientific Festival Urmia, West Azerbaijan (2022)
Publications Top Notes 📝
A Novel Algorithm for Image Encryption Based on Mixture of Chaotic Maps
Authors: S Behnia, A Akhshani, H Mahmodi, A Akhavan
Journal: Chaos, Solitons & Fractals
Year: 2008
Volume: 35
Issue: 2
Pages: 408-419
Citations: 552
A Fast Chaotic Encryption Scheme Based on Piecewise Nonlinear Chaotic Maps
Authors: S Behnia, A Akhshani, S Ahadpour, H Mahmodi, A Akhavan
Journal: Physics Letters A
Year: 2007
Volume: 366
Issues: 4-5
Pages: 391-396
Citations: 299
A Novel Scheme for Image Encryption Based on 2D Piecewise Chaotic Maps
Authors: A Akhshani, S Behnia, A Akhavan, HA Hassan, Z Hassan
Journal: Optics Communications
Year: 2010
Volume: 283
Issue: 17
Pages: 3259-3266
Citations: 166
Hierarchy of Chaotic Maps with an Invariant Measure
Authors: MA Jafarizadeh, S Behnia, S Khorram, H Nagshara
Journal: Journal of Statistical Physics
Year: 2001
Volume: 104
Pages: 1013-1028
Citations: 65
Nonlinear Transitions of a Spherical Cavitation Bubble
Authors: S Behnia, A Jafari, W Soltanpoor, O Jahanbakhsh
Journal: Chaos, Solitons & Fractals
Year: 2009
Volume: 41
Issue: 2
Pages: 818-828
Citations: 64
Suppressing Chaotic Oscillations of a Spherical Cavitation Bubble through Applying a Periodic Perturbation
Authors: S Behnia, AJ Sojahrood, W Soltanpoor, O Jahanbakhsh
Journal: Ultrasonics Sonochemistry
Year: 2009
Volume: 16
Issue: 4
Pages: 502-511
Citations: 60
Multiple-Watermarking Scheme Based on Improved Chaotic Maps
Authors: S Behnia, M Teshnehlab, P Ayubi
Journal: Communications in Nonlinear Science and Numerical Simulation
Year: 2010
Volume: 15
Issue: 9
Pages: 2469-2478
Citations: 54
Image Encryption Based on the Jacobian Elliptic Maps
Authors: S Behnia, A Akhavan, A Akhshani, A Samsudin
Journal: Journal of Systems and Software
Year: 2013
Volume: 86
Issue: 9
Pages: 2429-2438
Citations: 53
DNA Spintronics: Charge and Spin Dynamics in DNA Wires